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SCO5448 ABC transporter [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100888, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5448
Gene description
ABC transporter
Locus tag
SCO5448
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC3D11.05c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c5930669-5930646 PS00017 ATP/GTP-binding site motif A (P-loop)
  • Loc: c5930690-5930136 Pfam match to entry PF00005 ABC_tran, ABC transporter, score 146.30, E-value 5.4e-40
  • Loc: c5931707-5930892 Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region., score 66.90, E-value 4.2e-16
Names
ABC transporter
NP_629585.1
  • SC3D11.05c, probable ABC transporter, len: 583aa; similar to many eg. TR:Q54204 (EMBL:X89010) from the 5'-hydroxystreptomycin production/transport operon of Streptomyces glaucescens (591 aa) fasta scores; opt: 1687, z-score: 1814.2, E(): 0, 49.3% identity in 564 aa overlap. Contains Pfam match to entry PF00005 ABC_tran, ABC transporter, Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region and Prosite match to PS00017 ATP/GTP-binding site motif A (P-loop).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5930034..5931785 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629585.1 ABC transporter [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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