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SCO5446 SCO5446 [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100886, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5446
Gene description
SCO5446
Locus tag
SCO5446
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC3D11.03c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c5926283-5926254 PS00142 Neutral zinc metallopeptidases, zinc-binding region signature
  • Loc: c5926709-5925720 Pfam match to entry PF01447 Peptidase_M4, Thermolysin family peptidase, score 270.20, E-value 2.8e-77

Repeated regions

  • Loc: c5927146-5925736
Preferred Names
SCO5446
Names
hypothetical protein
NP_629583.1
  • SC3D11.03c, probable neutral zinc metalloprotease, len: 549aa; similar to many eg. SW:P05806 (NPRE_BACCE) bacillolysin precursor (EC 3.4.24.28) from Bacillus cereus (566 aa) fasta scores; opt: 607, z-score: 636.5, E(): 4.8e-28, 34.7% identity in 596 aa overlap. Also similar to the neighbouring CDS SC3D11.04c fasta scores; opt: 2442, z-score: 2158.9, E(): 0, 69.7% identity in 544 aa overlap and TR:CAB69762 (EMBL:AL137187) metalloproteinase from Streptomyces coelicolor fasta scores; opt: 1290, z-score: 1143.7, E(): 0, 52.7% identity in 560 aa overlap. Contains Pfam match to entry PF01447 Peptidase_M4, Thermolysin family peptidase and Prosite match to PS00142 Neutral zinc metallopeptidases, zinc-binding region signature. Contains possible hydrophobic membrane spanning region

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5925711..5927360 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629583.1 hypothetical protein SCO5446 [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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