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SCO5443 alpha-amylase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100883, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5443
Gene description
alpha-amylase
Locus tag
SCO5443
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
pep1A
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c5921463-5920234 Pfam match to entry PF00128 alpha-amylase, Alpha amylase, score -81.50, E-value 0.0017
Names
alpha-amylase
NP_629581.1
  • SC6A11.19c, pep1A, possible alpha-amylase, len: 675 aa; previously sequenced as TR:O54202 (EMBL:AJ001205). Also similar to TRNEW:AAF07898 (EMBL:AF172946) glucanase GlgE from Mycobacterium smegmatis (697 aa) fasta scores; opt: 2199, z-score: 2484.5, E(): 0, 53.6% identity in 679 aa overlap. Contains Pfam match to entry PF00128 alpha-amylase, Alpha amylase

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5920072..5922099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629581.1 alpha-amylase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9L1K2.1

Gene LinkOut

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