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SCO5430 extracellular solute-binding lipoprotein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100870, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5430
Gene description
extracellular solute-binding lipoprotein
Locus tag
SCO5430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC6A11.06c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c5902581-5901664 Pfam match to entry PF01547 SBP_bacterial_1, Bacterial extracellular solute-binding protein, score 91.90, E-value 1.3e-23
  • Loc: c5902971-5902939 PS00013 Prokaryotic membrane lipoprotein lipid attachment site
Names
extracellular solute-binding lipoprotein
NP_629568.1
  • SC6A11.06c, possible extracellular solute-binding lipoprotein, len: 458 aa; similar to many proposed solute-binding proteins e.g. TR:P72397 (EMBL:Y07706) maltose-binding protein from Streptomyces coelicolor (423 aa) fasta scores; opt: 284, z-score: 316.1, E(): 3.4e-10, 29.1% identity in 443 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1, Bacterial extracellular solute-binding protein, Prosite match to PS00013 Prokaryotic membrane lipoprotein lipid attachment site and possible N-terminal signal sequence

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5901634..5903010 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629568.1 extracellular solute-binding lipoprotein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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