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SCO5376 chitinase C [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100816, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO5376
Gene description
chitinase C
Locus tag
SCO5376
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SC6G5.20c; chiC
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: c5845812-5845774 PS00018 EF-hand calcium-binding domain
  • Loc: c5845962-5845936 PS01095 Chitinases family 18 active site
  • Loc: c5846364-5845300 Pfam match to entry PF00704 Glyco_hydro_18, Glycosyl hydrolases family 18, score 642.90, E-value 8.2e-191
  • Loc: c5846658-5846425 Pfam match to entry PF00041 fn3, Fibronectin type III domain, score 66.30, E-value 6.4e-16
  • Loc: c5846787-5846746 PS00561 Cellulose-binding domain, bacterial type
  • Loc: c5846982-5846689 Pfam match to entry PF00553 CBD_2, Cellulose binding domain, score 176.90, E-value 2.6e-50

General protein information

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Names
chitinase C
NP_629515.1
  • 2SC6G5.20c, chiC, chitinase C (EC 3.2.1.14) ( hypothetical protein), len: 609aa; previously sequenced as TR:Q9Z9M8 (EMBL:AB017010). Strongly similar to others from Streptomyces spp. e.g. SW:P11220 (CHIT_STRPL) chitinase 63 precursor from Streptomyces plicatus (610 aa) fasta scores; opt: 3997, z-score: 3833.9, E(): 0, 95.1% identity in 611 aa overlap. Contains Pfam match to entry PF00704 Glyco_hydro_18, Glycosyl hydrolases family 18, Pfam match to entry PF00041 fn3, Fibronectin type III domain, Pfam match to entry PF00553 CBD_2, Cellulose binding domain, Prosite match to PS00561 Cellulose-binding domain, bacterial type, Prosite match to PS01095 Chitinases family 18 active site and Prosite match to PS00018 EF-hand calcium-binding domain. Also contains a possible non-cleavable N-terminal signal sequence.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5845252..5847081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629515.1 chitinase C [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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