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rpmE 50S ribosomal protein L31 [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100799, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
rpmE
Gene description
50S ribosomal protein L31
Locus tag
SCO5359
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SC6G5.03; rpmE3
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 5830020-5830223 Pfam match to entry PF01197 Ribosomal_L31, Ribosomal protein L31, score 120.60, E-value 2.9e-32
  • Loc: 5830143-5830199 PS01143 Ribosomal protein L31 signature
Names
50S ribosomal protein L31
NP_629498.1
  • RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5830020..5830244
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629498.1 50S ribosomal protein L31 [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9K4E5.1

Gene LinkOut

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