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SCO5353 diaminopimelate decarboxylase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100793, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5353
Gene description
diaminopimelate decarboxylase
Locus tag
SCO5353
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
lysA; SCBAC5H2.22
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 5820860-5821957 Pfam match to entry PF00278 Orn_DAP_Arg_deC, Pyridoxal-dependent decarboxylase, score 400.80, E-value 5.1e-119
  • Loc: 5820938-5820994 PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site
  • Loc: 5821460-5821501 PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2
Names
diaminopimelate decarboxylase
NP_629493.1
  • SCBAC5H2.22, lysA, diaminopimelate decarboxylase, len: 463 aa; highly similar to SW:DCDA_CORGL (EMBL:X07563) Corynebacterium glutamicum diaminopimelate decarboxylase (EC 4.1.1.20) LysA, 445 aa; fasta scores: opt: 1503 z-score: 1722.5 E(): 0; 51.0% identity in 443 aa overlap. Contains Pfam match to entry PF00278 Orn_DAP_Arg_deC, Pyridoxal-dependent decarboxylase and matches to Prosite entries PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site and PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5820662..5822053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629493.1 diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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