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SCO5232 sugar transporter sugar binding protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100673, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO5232
Gene description
sugar transporter sugar binding protein
Locus tag
SCO5232
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC7E4.29
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. a novel ABC transporter for the uptake of N,N'-diacetylchitobiose in Streptomyces coelicolor A3(2).
    Title: The dasABC gene cluster, adjacent to dasR, encodes a novel ABC transporter for the uptake of N,N'-diacetylchitobiose in Streptomyces coelicolor A3(2).
Submit: New GeneRIF Correction

General gene information

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Homology

Miscellaneous features

  • Loc: 5692322-5692354 PS00013 Prokaryotic membrane lipoprotein lipid attachment site
  • Loc: 5692706-5693338 Pfam match to entry PF01547 SBP_bacterial_1, Bacterial extracellular solute-binding protein, score 77.40, E-value 1e-20

General protein information

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Names
sugar transporter sugar binding protein
NP_629379.1
  • SC7E4.29, possible sugar transporter sugar binding protein, len: 425 aa; similar to TR:Q9RK79 (EMBL:AL132662) Streptomyces coelicolor sugar transporter sugar binding protein SCF11.11, 422 aa; fasta scores: opt: 917 z-score: 991.5 E(): 0; 37.9% identity in 417 aa overlap and to SW:MALX_STRPN (EMBL:L08611) Streptococcus pneumoniae maltose/maltodextrin-binding protein precursor MalX, 423 aa; fasta scores: opt: 312 z-score: 340.7 E(): 1.7e-11; 22.9% identity in 428 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1, Bacterial extracellular solute-binding protein and correctly situated match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains also possible N-terminal region signal peptide sequence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5692292..5693569
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629379.1 sugar transporter sugar binding protein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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