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SCO5231 GntR family transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100672, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5231
Gene description
GntR family transcriptional regulator
Locus tag
SCO5231
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC7E4.28c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c5691707-5691633 PS00043 Bacterial regulatory proteins, gntR family signature
  • Loc: c5691722-5691585 Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family, score 65.80, E-value 8.7e-19
Names
GntR family transcriptional regulator
NP_629378.1
  • SC7E4.28c, probable gntR-family transcriptional regulator, len: 254 aa; similar to SW:HUTC_PSEPU (EMBL:M33922) Pseudomonas putida histidine utilization repressor HutC, 248 aa; fasta scores: opt: 355 z-score: 415.1 E(): 1.2e-15; 31.6% identity in 234 aa overlap. Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family and match to Prosite entry PS00043 Bacterial regulatory proteins, gntR family signature. Contains also a possible helix-turn-helix motif at residues 45..66 (+3.08 SD)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5691072..5691836 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629378.1 GntR family transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9K492.1

Gene LinkOut

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