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SCO5039 penicillin-binding protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100480, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO5039
Gene description
penicillin-binding protein
Locus tag
SCO5039
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCK7.12
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 5475095-5475598 Pfam match to entry PF00912 Transglycosyl, Transglycosylase, score 190.50, E-value 2.6e-53
  • Loc: 5475866-5476801 Pfam match to entry PF00905 Transpeptidase, Penicillin binding protein transpeptidase domain, score 74.70, E-value 1.9e-18
  • Loc: 5476655-5476678 PS00017 ATP/GTP-binding site motif A (P-loop)
Names
penicillin-binding protein
NP_629191.1
  • SCK7.12, possible penicillin-binding protein, len: 773 aa; similar to TR:CAB88838 (EMBL:AL353832) Streptomyces coelicolor probable penicillin-binding protein SCE6.34, 756 aa; fasta scores: opt: 1080 z-score: 911.6 E(): 0; 46.0% identity in 733 aa overlap and to SW:PBPD_BACSU (EMBL:U11882) Bacillus subtilis penicillin-binding protein 4 precursor PbpD, 624 aa; fasta scores: opt: 513 z-score: 438.2 E(): 6.1e-17; 28.7% identity in 582 aa overlap. Contains Pfam matches to entries PF00912 Transglycosyl, Transglycosylase and PF00905 Transpeptidase, Penicillin binding protein transpeptidase domain and 2x matches to Prosite entry PS00017 ATP/GTP-binding site motif A (P-loop)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5475026..5477176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629191.1 penicillin-binding protein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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