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SCO5017 AraC family transcription regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100458, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO5017
Gene description
AraC family transcription regulator
Locus tag
SCO5017
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCK15.19
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 5453222-5453224 TTA leucine codon. Possible target for bldA regulation
  • Loc: 5453297-5453563 Pfam match to entry PF00165 HTH_AraC, Bacterial regulatory helix-turn-helix proteins, araC family, score 70.90, E-value 2.7e-17
  • Loc: 5453405-5453542 PS00041 Bacterial regulatory proteins, araC family signature

General protein information

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Names
AraC family transcription regulator
NP_629169.1
  • SCK15.19, possible araC family regulatory protein, len: 365 aa; similar to TR:Q54308 (EMBL:X86780) Streptomyces hygroscopicus helix-turn-helix DNA-binding protein, 330 aa; fasta scores: opt: 247 z-score: 294.6 E(): 6.1e-09; 28.6% identity in 346 aa overlap. Contains fam match to entry PF00165 HTH_AraC, Bacterial regulatory helix-turn-helix proteins, araC family and match to Prosite entry PS00041 Bacterial regulatory proteins, araC family signature. Contains also a TTA leucine codon, possible target for bldA regulation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5452526..5453623
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629169.1 AraC family transcription regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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