U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCO4971 dehydrogenase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100412, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO4971
Gene description
dehydrogenase
Locus tag
SCO4971
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SCK31.31
Try the new Gene page
Try the new Transcripts and proteins table
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 5406204-5406419 Pfam match to entry PF00111 fer2, 2Fe-2S iron-sulfur cluster binding domains, score 37.80, E-value 2.6e-07
  • Loc: 5406312-5406338 PS00197 2Fe-2S ferredoxins, iron-sulfur binding region signature
  • Loc: 5406441-5406755 Pfam match to entry PF01799 fer2_2, [2Fe-2S] binding domain, score 80.70, E-value 3.1e-20
  • Loc: 5406834-5407682 Pfam match to entry PF00941 dehydrog_molyb, Molybdopterin binding domain in dehydrogenase, score 220.00, E-value 3.6e-62
Names
dehydrogenase
NP_629123.1
  • 2SCK31.31, possible dehydrogenase, len: 497 aa; similar to N-terminal domain of SW:XDH_MOUSE (EMBL:X75129) Mus musculus xanthine dehydrogenase/oxidase Xdh, 1335 aa; fasta scores: opt: 345 z-score: 361.7 E(): 1.3e-12 31.5% identity in 483 aa overlap and to TR:O54050 (EMBL:AJ001013) Rhodobacter capsulatus xanthine dehydrogenase (EC 1.1.1.204) XdhA, 462 aa; fasta scores: opt: 631 z-score: 669.1 E(): 9.8e-30; 38.2% identity in 495 aa overlap. Contains Pfam matches to entries PF00111 fer2, 2Fe-2S iron-sulfur cluster binding domains, PF01799 fer2_2, [2Fe-2S] binding domain and PF00941 dehydrog_molyb, Molybdopterin binding domain in dehydrogenase and match to Prosite entry PS00197 2Fe-2S ferredoxins, iron-sulfur binding region signature

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5406195..5407688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629123.1 dehydrogenase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.