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SCO4944 DNA-binding protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1100385, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO4944
Gene description
DNA-binding protein
Locus tag
SCO4944
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SCK31.04c
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: c5378643-5378470 Pfam match to entry PF01381 HTH_3, Helix-turn-helix, score 25.50, E-value 0.0012

General protein information

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Names
DNA-binding protein
NP_629096.1
  • 2SCK31.04c, possible DNA-binding protein, len: 314 aa; similar to TR:Q9RI67 (EMBL:AL109949) Streptomyces coelicolor DNA-binding protein SCJ11.39c, 279 aa; fasta scores: opt: 544 z-score: 640.7 E(): 3.8e-28; 40.2% identity in 249 aa overlap. Contains Pfam match to entry PF01381 HTH_3, Helix-turn-helix and possible helix-turn-helix motif at residues 64..85 (+4.67 SD)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    5377855..5378730 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_629096.1 DNA-binding protein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Gene LinkOut

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