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SCO4434 LysR family transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1099874, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO4434
Gene description
LysR family transcriptional regulator
Locus tag
SCO4434
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCD6.12
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 4853081-4853509 Pfam match to entry PF00126 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family, score 129.80, E-value 4.9e-35
  • Loc: 4853123-4853215 PS00044 Bacterial regulatory proteins, lysR family signature
Names
LysR family transcriptional regulator
NP_628601.1
  • SCD6.12, probable LysR-family transcriptional regulator, len: 298 aa; similar to TR:Q9X9U9 (EMBL:Y18817) Streptomyces coelicolor A3(2) transcriptional regulator of LysR family, 307 aa; fasta scores: opt: 736 z-score: 859.4 E(): 0; 43.6% identity in 303 aa overlap. Contains Pfam match to entry PF00126 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family, match to Prosite entry PS00044 Bacterial regulatory proteins, lysR family signature and possible helix-turn-helix motif at residues 18..39 (+4.94 SD)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    4853069..4853965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_628601.1 LysR family transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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