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SCO4230 response regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1099670, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO4230
Gene description
response regulator
Locus tag
SCO4230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCD8A.03
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 4634485-4634811 Pfam match to entry PF00072 response_reg, Response regulator receiver domain, score 130.30, E-value 3.4e-35
  • Loc: 4634920-4635138 Pfam match to entry PF00486 trans_reg_C, Transcriptional regulatory protein, C terminal, score 117.10, E-value 9.8e-34
Names
response regulator
NP_628404.1
  • SCD8A.03, probable response regulator, len: 223 aa; similar to TR:O86269 (EMBL:AJ001103) Lactococcus lactis ArcA protein, 233 aa; fasta scores: opt: 700 z-score: 810.0 E(): 0; 49.3% identity in 223 aa overlap and to TR:Q56180 (EMBL:U38917) Synechococcus sp. response regulator PhoB, 234 aa; fasta scores: opt: 687 z-score: 795.1 E(): 0; 48.0% identity in 229 aa overlap, and similar to many S. coelicolor response regulators, e.g. SCH22A.19c, 256 aa; fasta scores: opt: 687 z-score: 696.9 E(): 2.5e-33; 49.1% identity in 224 aa overlap. Contains Pfam matches to entries PF00072 response_reg, Response regulator receiver domain and PF00486 trans_reg_C, Transcriptional regulatory protein, C terminal

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    4634485..4635156
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_628404.1 response regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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