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baz2a bromodomain adjacent to zinc finger domain 2A [ Monopterus albus (swamp eel) ]

Gene ID: 109966049, updated on 8-Sep-2017

Summary

Gene symbol
baz2a
Gene description
bromodomain adjacent to zinc finger domain 2A
Gene type
protein coding
RefSeq status
MODEL
Organism
Monopterus albus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae; Monopterus
Orthologs

Genomic context

See baz2a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current M_albus_1.0 (GCF_001952655.1) Unplaced Scaffold NW_018127986.1 (1590191..1607736, complement)

NW_018127986.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein 24-A-like Neighboring gene lens fiber major intrinsic protein-like Neighboring gene aquaporin-4-like Neighboring gene prostaglandin E synthase 3 Neighboring gene nascent polypeptide associated complex subunit alpha

Genomic regions, transcripts, and products

Genomic Sequence:
NW_018127986.1 Unplaced Scaffold Reference M_albus_1.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
bromodomain adjacent to zinc finger domain protein 2A

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Monopterus albus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_albus_1.0 Primary Assembly

Genomic

  1. NW_018127986.1 Reference M_albus_1.0 Primary Assembly

    Range
    1590191..1607736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020610619.1XP_020466275.1  bromodomain adjacent to zinc finger domain protein 2A isoform X2

    Conserved Domains (8) summary
    cd05503
    Location:25822678
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    cd01397
    Location:12441316
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:24622508
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam09606
    Location:5189
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam15613
    Location:21992232
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl02674
    Location:15861649
    DDT; DDT domain
    cl25496
    Location:403733
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl28033
    Location:260489
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  2. XM_020610621.1XP_020466277.1  bromodomain adjacent to zinc finger domain protein 2A isoform X2

    Conserved Domains (8) summary
    cd05503
    Location:25822678
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    cd01397
    Location:12441316
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:24622508
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam09606
    Location:5189
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam15613
    Location:21992232
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl02674
    Location:15861649
    DDT; DDT domain
    cl25496
    Location:403733
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl28033
    Location:260489
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  3. XM_020610620.1XP_020466276.1  bromodomain adjacent to zinc finger domain protein 2A isoform X2

    Conserved Domains (8) summary
    cd05503
    Location:25822678
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    cd01397
    Location:12441316
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:24622508
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam09606
    Location:5189
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam15613
    Location:21992232
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl02674
    Location:15861649
    DDT; DDT domain
    cl25496
    Location:403733
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl28033
    Location:260489
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
  4. XM_020610623.1XP_020466279.1  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    Conserved Domains (7) summary
    cd05503
    Location:25782674
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    cd01397
    Location:12401312
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:24582504
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam09606
    Location:6450
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam15613
    Location:21952228
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl02674
    Location:15821645
    DDT; DDT domain
    cl26464
    Location:261717
    Atrophin-1; Atrophin-1 family
  5. XM_020610618.1XP_020466274.1  bromodomain adjacent to zinc finger domain protein 2A isoform X1

    Conserved Domains (8) summary
    cd05503
    Location:25832679
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    cd01397
    Location:12451317
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:24632509
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam09606
    Location:6190
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam15613
    Location:22002233
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
    cl02674
    Location:15871650
    DDT; DDT domain
    cl25496
    Location:404734
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl28033
    Location:261490
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

RNA

  1. XR_002275716.1 RNA Sequence

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