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SCO4211 integrase, partial CDS [ Streptomyces coelicolor A3(2) ]

Gene ID: 1099651, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO4211
Gene description
integrase, partial CDS
Locus tag
SCO4211
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SCD46.25c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Names
integrase, partial CDS
NP_628386.1
  • 2SCD46.25c, possible integrase, partial CDS, len: 202aa; similar to the C-terminal region of many integrases many eg. SW:P09999 (INT2_ECOLI) integrase/recombinase (E2 protein) from plasmid IncN R46 of Escherichia coli (337 aa) fasta scores; opt: 160, z-score: 193.9, E(): 0.0025, 28.7% identity in 195 aa overlap and TR:O86766 (EMBL:AL031035) TraSA:integrase fusion protein from Streptomyces coelicolor (768 aa) fasta scores; .opt: 824, z-score: 963.6, E(): 0, 65.3% identity in 190 aa overlap.

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    4619432..4620040 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_628386.1 integrase, partial CDS, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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