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SCO4024 integral membrane efflux protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1099460, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO4024
Gene description
integral membrane efflux protein
Locus tag
SCO4024
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SC10A7.28
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: 4421382-4421432 PS00216 Sugar transport proteins signature 1
  • Loc: 4422540-4422587 PS00012 Phosphopantetheine attachment site

General protein information

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Names
integral membrane efflux protein
NP_628206.1
  • 2SC10A7.28, probable integral membrane efflux protein, len: 507 aa; highly similar to TR:Q54806 (EMBL:X84072) Streptomyces pristinaespiralis integral membrane protein Ptr, 501 aa; fasta scores: opt: 2316 z-score: 2400.3 E(): 0; 72.8% identity in 496 aa overlap and to TR:Q9XE01 (EMBL:AB019519) virginiamycin S resistance protein from Streptomyces virginiae (518 aa) fasta scores; opt: 1972, Z-score: 1995.4, 62.828% identity (63.992% ungapped) in 495 aa overlap. Contains matches to Prosite entries PS00216 Sugar transport proteins signature 1 and PS00012 Phosphopantetheine attachment site. Also contains possible hydrophobic membrane spanning region

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    4421136..4422659
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_628206.1 integral membrane efflux protein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Molecular Biology Databases