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rfx3 regulatory factor X3 [ Rhincodon typus (whale shark) ]

Gene ID: 109931646, updated on 8-Sep-2017

Summary

Gene symbol
rfx3
Gene description
regulatory factor X3
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Orthologs

Genomic context

See rfx3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018065587.1 (69992..300009, complement)

NW_018065587.1Genomic Context describing neighboring genes Neighboring gene histone-arginine methyltransferase CARM1-like

Genomic regions, transcripts, and products

Genomic Sequence:
NW_018065587.1 Unplaced Scaffold Reference ASM164234v2 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164234v2 Primary Assembly

Genomic

  1. NW_018065587.1 Reference ASM164234v2 Primary Assembly

    Range
    69992..300009 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020530903.1XP_020386492.1  transcription factor RFX3 isoform X6

    Conserved Domains (2) summary
    pfam02257
    Location:178250
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:47128
    RFX1_trans_act; RFX1 transcription activation region
  2. XM_020530902.1XP_020386491.1  transcription factor RFX3 isoform X5

    Conserved Domains (2) summary
    pfam02257
    Location:149225
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:47128
    RFX1_trans_act; RFX1 transcription activation region
  3. XM_020530901.1XP_020386490.1  transcription factor RFX3 isoform X4

    Conserved Domains (2) summary
    pfam02257
    Location:178250
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:47128
    RFX1_trans_act; RFX1 transcription activation region
  4. XM_020530900.1XP_020386489.1  transcription factor RFX3 isoform X3

    Conserved Domains (2) summary
    pfam02257
    Location:203275
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:47128
    RFX1_trans_act; RFX1 transcription activation region
  5. XM_020530899.1XP_020386488.1  transcription factor RFX3 isoform X2

    Conserved Domains (2) summary
    pfam02257
    Location:203275
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:47128
    RFX1_trans_act; RFX1 transcription activation region
  6. XM_020530898.1XP_020386487.1  transcription factor RFX3 isoform X1

    Conserved Domains (2) summary
    pfam02257
    Location:203275
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:47128
    RFX1_trans_act; RFX1 transcription activation region
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