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cyrib CYFIP related Rac1 interactor B [ Rhincodon typus (whale shark) ]

Gene ID: 109913487, updated on 3-Dec-2024
Gene symbol
cyrib
Gene description
CYFIP related Rac1 interactor B
See related
EnsemblRapid:ENSRTYG00015020354
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Also known as
fam49b
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Try the new Transcripts and proteins table
See cyrib in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 4 NC_063335.1 (47424984..47608886, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018032549.1 (51505..234272)

Chromosome 4 - NC_063335.1Genomic Context describing neighboring genes Neighboring gene myc proto-oncogene protein-like Neighboring gene uncharacterized LOC125482882 Neighboring gene uncharacterized LOC109913488 Neighboring gene uncharacterized LOC125482925 Neighboring gene arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like Neighboring gene transmembrane protein 65

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of T cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
CYFIP-related Rac1 interactor B
Names
family with sequence similarity 49 member B

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063335.1 Reference sRhiTyp1.1

    Range
    47424984..47608886 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048595732.1 → XP_048451689.1  CYFIP-related Rac1 interactor B isoform X2

    UniProtKB/TrEMBL
    A0A7M4DUF3
    Related
    ENSRTYP00015032016.1, ENSRTYT00015035495.1

  2. XM_020513008.2 → XP_020368597.1  CYFIP-related Rac1 interactor B isoform X1

    UniProtKB/TrEMBL
    A0A7M4DUF3
    Conserved Domains (1) summary
    pfam07159
    Location:18 → 320
    DUF1394; Protein of unknown function (DUF1394)

  3. XM_048595738.1 → XP_048451695.1  CYFIP-related Rac1 interactor B isoform X3

  4. XM_048595736.1 → XP_048451693.1  CYFIP-related Rac1 interactor B isoform X3

  5. XM_020513009.2 → XP_020368598.1  CYFIP-related Rac1 interactor B isoform X1

    UniProtKB/TrEMBL
    A0A7M4DUF3
    Conserved Domains (1) summary
    pfam07159
    Location:18 → 320
    DUF1394; Protein of unknown function (DUF1394)

  6. XM_048595734.1 → XP_048451691.1  CYFIP-related Rac1 interactor B isoform X1

    UniProtKB/TrEMBL
    A0A7M4DUF3

  7. XM_048595733.1 → XP_048451690.1  CYFIP-related Rac1 interactor B isoform X1

    UniProtKB/TrEMBL
    A0A7M4DUF3

  8. XM_020513006.2 → XP_020368595.1  CYFIP-related Rac1 interactor B isoform X1

    UniProtKB/TrEMBL
    A0A7M4DUF3
    Conserved Domains (1) summary
    pfam07159
    Location:18 → 320
    DUF1394; Protein of unknown function (DUF1394)

  9. XM_048595735.1 → XP_048451692.1  CYFIP-related Rac1 interactor B isoform X1

    UniProtKB/TrEMBL
    A0A7M4DUF3
    Related
    ENSRTYP00015032007.1, ENSRTYT00015035486.1
Nucleotide Protein
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