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SCO3623 transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1099059, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO3623
Gene description
transcriptional regulator
Locus tag
SCO3623
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC66T3.34; SCH10.01
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 4003201-4003377 Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family, score 53.30, E-value 6.5e-15
  • Loc: 4003489-4003532 overlap with S.coelicolor cosmid St66T3 from 35058 35101
Names
transcriptional regulator
NP_733612.1
  • SCH10.01, hypothetical protein, partial CDS, len: >119 aa; probable CDS suggested by positional base preference, GC frame analysis and amino acid composition
    SC66T3.34, probable gntR-family transcriptional regulator, partial CDS, len: >128 aa; similar to many e.g. (EMBL:U91412), luxZ, Photobacterium leiognathi lux operon enhancer (221 aa), fasta scores; opt: 197 z-score: 240.2 E(): 4.7e-06, 32.2% identity in 87 aa overlap. Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    4003147..4003848
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_733612.1 transcriptional regulator, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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