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SCO3361 transcription regulator AsnC [ Streptomyces coelicolor A3(2) ]

Gene ID: 1098798, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO3361
Gene description
transcription regulator AsnC
Locus tag
SCO3361
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCE94.12c
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. findings indicate that SCO3361 functions as a pleiotropic regulator controlling secondary metabolism and morphological development
    Title: Characterization of an Lrp/AsnC family regulator SCO3361, controlling actinorhodin production and morphological development in Streptomyces coelicolor.
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General gene information

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Miscellaneous features

  • Loc: c3720505-3720194 Pfam match to entry PF01037 ASNC_trans_reg, AsnC family, score 111.00, E-value 2.3e-29.

General protein information

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Names
transcription regulator AsnC
NP_627569.1
  • SCE94.12c, lrpA, probable AsnC-family transcriptional regulator, len: 150a a; previously sequenced therefore identical to TR:E1358530 (EMBL:AJ131213) LrpA, transcriptional regulator from Streptomyces coelicolor (150 aa) fasta scores; opt: 953, z-score: 1220.9, E(): 0, (100.0% identity in 150 aa overlap). Also similar to many amino acid responsive regulators e.g. TR:O33467 (EMBL:D89015) MdeR, transcriptional regulator from Pseudomonas putida (159 aa) fasta scores; opt: 380, z-score: 494.5, E(): 3.1e-20, (40.0% identity in 150 aa overlap). Contains Pfam match to entry PF01037 ASNC_trans_reg, AsnC family. Also contains a possible helix-turn-helix at 19-40aa (+4.10 SD).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    3720125..3720577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_627569.1 transcription regulator AsnC [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Gene LinkOut

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