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SCO3264 GntR family transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1098698, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO3264
Gene description
GntR family transcriptional regulator
Locus tag
SCO3264
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCE39.14c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c3614281-3614207 PS00043 Bacterial regulatory proteins, gntR family signature.
  • Loc: c3614338-3614159 Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family, score 71.10, E-value 2e-20.
Names
GntR family transcriptional regulator
NP_627476.1
  • SCE39.14c, possible gntR-family regulator, len: 243aa; weak similarity to many egs. SW:FARR_ECOLI fatty acyl responsive regulator from Escherichia coli (240 aa) fasta scores; opt: 196, z-score: 243.9, E(): 2.8e-06, (24.3% identity in 243 aa overlap) and SW:KORA_STRLI KorA protein found to control plasmid transfer in the Streptomyces lividans plasmid pIJ101 (241 aa) fasta scores; opt: 158, z-score: 198.3, E(): 0.00098, (22.0% identity in 227 aa overlap). Contains Pfam match to entry PF00392 gntR, Bacterial regulatory proteins, gntR family and Prosite match to PS00043 Bacterial regulatory proteins, gntR family signature. Also contains probable helix-turn-helix (+3.94 SD) 29-50aa

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    3613628..3614359 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_627476.1 GntR family transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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