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SCO3202 RNA polymerase principal sigma factor [ Streptomyces coelicolor A3(2) ]

Gene ID: 1098636, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO3202
Gene description
RNA polymerase principal sigma factor
Locus tag
SCO3202
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
hrdD; SCE22.19c
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: c3510503-3510423 PS00716 Sigma-70 factors family signature 2
  • Loc: c3511010-3510969 PS00715 Sigma-70 factors family signature 1
  • Loc: c3511100-3510417 Pfam match to entry PF00140 sigma70, Sigma-70 factor, score 421.20, E-value 9.8e-123

General protein information

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Names
RNA polymerase principal sigma factor
NP_627416.1
  • SCE22.19c, hrdD, RNA polymerase principal sigma factor, len: 332 aa; identical to previously sequenced SW:HRDD_STRCO (EMBL:X52982) Streptomyces coelicolor RNA polymerase principal sigma factor HrdD, 332 aa. Contains Pfam match to entry PF00140 sigma70, Sigma-70 factor and matches to Prosite entries PS00715 Sigma-70 factors family signature 1 and PS00716 Sigma-70 factors family signature 2. Contains also possible helix-turn-helix motif at residues 292..313 (+5.89 SD)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    3510381..3511379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_627416.1 RNA polymerase principal sigma factor [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P18249.2

Gene LinkOut

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Molecular Biology Databases