U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCO3042 transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1098475, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

Go to the top of the page Help
Gene symbol
SCO3042
Gene description
transcriptional regulator
Locus tag
SCO3042
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCE34.23
NEW
Try the new Gene table
Try the new Transcript table

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General protein information

Go to the top of the page Help
Names
transcriptional regulator
NP_627264.1
  • SCE34.23, possible transcriptional regulator, len: 396 aa; similar to TR:O86796 (EMBL:AL031317) Streptomyces coelicolor transcriptional regulator SC6G4.33, 360 aa; fasta scores: opt: 792 z-score: 875.9 E(): 0; 43.3% identity in 363 aa overlap, to TR:O68907 (EMBL:AF05830) Streptomyces roseofulvus FrnA, 770 aa; fasta scores: opt: 686 z-score: 739.2 E(): 0; 41.3% identity in 283 aa overlap, to Streptomyces coelicolor SCE34.26, 507 aa; fasta scores: opt: 709 z-score: 659.1 E(): 3.4e-31; 36.4% identity in 357 aa overlap, StE34.25, 507 aa; fasta scores: opt: 671 z-score: 624.0 E(): 3e-29;33.2% identity in 365 aa overlap, to SCE34.24, 472 aa; fasta scores: opt: 666 z-score: 619.9 E(): 5.2e-29; 38.0% identity in 324 aa overlap and to SCE34.27 (partial), >356 aa; fasta scores: opt: 554 z-score: 518.2 E(): 2.4e-23; 35.7% identity in 361 aa overlap. Contains a possible hydrophobic membrane spanning region at N-terminal domain

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    3329406..3330596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_627264.1 transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.