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SCO2937 transmembrane transport protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1098370, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO2937
Gene description
transmembrane transport protein
Locus tag
SCO2937
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCE19A.37c; SCE56.01c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Names
transmembrane transport protein
NP_733586.1
  • SCE56.01c, possible transport protein (partial), len: >170 aa; similar to TR:AAF11647 (EMBL:AE002045) Deinococcus radiodurans conserved hypothetical protein DR2098, 462 aa; fasta scores: opt: 330 z-score: 380.0 E(): 9.3e-14; 37.4% identity in 155 aa overlap and to TR:O69070 (EMBL:AF079900) Streptomyces rimosus tetracycline efflux protein OtrB, 563 aa; fasta scores: opt: 271 z-score: 312.6 E(): 5.3e-10; 34.8% identity in 158 aa overlap. Contains possible hydrophobic membrane spanning regions
    SCE19A.37c, possible transmembrane transport protein, partial CDS, len: >344 aa; weak similarity to transport proteins, many hypothetical e.g. TR:Q50392 (EMBL:U40487), lfrA, Mycobacterium smegmatis proton antiporter efflux pump (504 aa), fasta scores; opt: 220 z-score: 251.9 E(): 1.1e-06, 27.8% identity in 345 aa overlap. Weak similarity to part of others from S.coelicolor e.g. TR:Q9ZBJ1 (EMBL:AL035161) S.coelicolor probable efflux protein (815 aa) (27.2% identity in 345 aa overlap). Contains hydrophobic, possible membrane-spanning regions

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    3189296..3190747 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_733586.1 transmembrane transport protein, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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