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LOC109836384 non-lysosomal glucosylceramidase [ Asparagus officinalis (garden asparagus) ]

Gene ID: 109836384, updated on 21-Dec-2023

Summary

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Gene symbol
LOC109836384
Gene description
non-lysosomal glucosylceramidase
Locus tag
A4U43_C04F1390
Gene type
protein coding
RefSeq status
MODEL
Organism
Asparagus officinalis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Genomic context

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Location:
chromosome: 4
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Aspof.V1 (GCF_001876935.1) 4 NC_033797.1 (3420899..3435490)

Chromosome 4 - NC_033797.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109836255 Neighboring gene uncharacterized LOC109836256 Neighboring gene serine/threonine-protein kinase GRIK1-like Neighboring gene uncharacterized LOC109836386 Neighboring gene 3-ketoacyl-CoA synthase 19-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_033797.1 Chromosome 4 Reference Aspof.V1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-lysosomal glucosylceramidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aspof.V1

Genomic

  1. NC_033797.1 Reference Aspof.V1

    Range
    3420899..3435490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020404273.1 → XP_020259862.1  non-lysosomal glucosylceramidase

    UniProtKB/TrEMBL
    A0A5P1EY39
    Conserved Domains (2) summary
    pfam04685
    Location:554 → 915
    DUF608; Glycosyl-hydrolase family 116, catalytic region
    pfam12215
    Location:102 → 421
    Glyco_hydr_116N; beta-glucosidase 2, glycosyl-hydrolase family 116 N-term
Nucleotide Protein
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