U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCO2794 LacI family transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1098228, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO2794
Gene description
LacI family transcriptional regulator
Locus tag
SCO2794
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SCC13.02c
Try the new Gene page
Try the new Transcripts and proteins table
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c3050685-3049948 Pfam match to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and sugar binding domain of the LacI family., score 159.90, E-value 4.3e-44
  • Loc: c3050847-3050791 PS00356 Bacterial regulatory proteins, lacI family signature
  • Loc: c3050859-3050776 Pfam match to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 35.50, E-value 1.5e-08
Names
LacI family transcriptional regulator
NP_627024.1
  • 2SCC13.02c, lacI-family transcriptional regulatory protein, len: 351 aa; highly similar to TR:Q9X9R3 (EMBL:AJ009798) Streptomyces reticuli CebR protein, 350 aa; fasta scores: opt: 2011 z-score: 2174.4 E(): 0; 89.4% identity in 350 aa overlap and C-terminal region identical to TR:BAB03462 (EMBL:AB036424) Streptomyces coelicolor transcriptional regulator (fragment) ORF5-H, 193 aa. Contains Pfam matches to entries PF00356 lacI, Bacterial regulatory proteins, lacI family and PF00532 Peripla_BP_like, Periplasmic binding proteins and sugar binding domain of the LacI family and match to Prosite entry PS00356 Bacterial regulatory proteins, lacI family signature. Also contains a possible helix-turn-helix motif at residues 14..35 (+6.05 SD)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    3049837..3050892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_627024.1 LacI family transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.