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SCO2294 AraC family transcription regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1097728, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO2294
Gene description
AraC family transcription regulator
Locus tag
SCO2294
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCC30.02c
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: c2464497-2464240 Pfam match to entry PF00165 HTH_AraC, Bacterial regulatory helix-turn-helix proteins, araC family, score 59.80, E-value 5.8e-14

General protein information

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Names
AraC family transcription regulator
NP_626542.1
  • SCC30.02c, probable araC-family regulatory protein, len: 278 aa; similar to SW:ARAC_SALTY (EMBL:J01797) Salmonella typhimurium arabinose operon regulatory protein AraC, 281 aa; fasta scores: opt: 232 z-score: 270.4 E(): 1.3e-07; 26.7% identity in 270 aa overlap and to various Streptomyces coelicolor araC-family transcriptional regulators, e.g. TR:O50480 (EMBL:AL031031) S. coelicolor transcriptional regulator SC7C7.17 (SC4H8.01), 288 aa; fasta scores: opt: 638 z-score: 605.1 E(): 3.3e-28; 43.8% identity in 292 aa overlap. Contains Pfam match to entry PF00165 HTH_AraC, Bacterial regulatory helix-turn-helix proteins, araC family and possible helix-turn-helix motif at residues 189..210 (+3.81 SD)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    2464222..2465058 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_626542.1 AraC family transcription regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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