U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCO1782 hypothetical protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1097213, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO1782
Gene description
hypothetical protein
Locus tag
SCO1782
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCI51.22c
Try the new Gene page
Try the new Transcripts and proteins table
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Deletion of SCO1782 resulted in complete loss of hemolysin activity in S. coelicolor.
    Title: Functional analysis of the gene SCO1782 encoding Streptomyces hemolysin (S-hemolysin) in Streptomyces coelicolor M145.
Submit: New GeneRIF Correction

Miscellaneous features

  • Loc: c1907947-1907924 PS00017 ATP/GTP-binding site motif A (P-loop)
  • Loc: c1908022-1907834 Pfam match to entry PF01479 S4, S4 domain, score 51.20, E-value 2.2e-11
Names
hypothetical protein
NP_626053.1
  • SCI51.22c, possible membrane protein, len: 271 aa; unknown function, similar to hemolysins and hemolysin-like hypothetical proteins e.g. SW:HLYA_TREHY (EMBL:X61684), tlyA, Treponema hyodysenteriae hemolysin A (240 aa), fasta scores; opt: 457 z-score: 532.9 E(): 2.5e-22, 35.4% identity in 240 aa overlap and TR:Q50760 (EMBL:X98295), tlyA, Mycobacterium tuberculosis. Contains a hydrophobic, possible membrane-spanning region. Contains Pfam match to entry PF01479 S4, S4 domain and PS00017 ATP/GTP-binding site motif A (P-loop)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1907225..1908040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_626053.1 hypothetical protein SCO1782 [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.