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SCO1539 lipoprotein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096965, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO1539
Gene description
lipoprotein
Locus tag
SCO1539
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCL2.29c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c1648759-1647920 Pfam match to entry PF01547 SBP_bacterial_1, Bacterial extracellular solute-binding protein, score 61.70, E-value 1.5e-14
  • Loc: c1649131-1649099 PS00013 Prokaryotic membrane lipoprotein lipid attachment site
Names
lipoprotein
NP_625818.1
  • SCL2.29c, possible hypothetical protein, len: 433 aa; similar to TR:O31518 (EMBL:Z99107) Bacillus subtilis YesO protein, 412 aa; fasta scores: opt: 606 z-score: 680.7 E(): 1.7e-30; 27.7% identity in 411 aa overlap and to TR:CAB59595 (EMBL:AL132662) Streptomyces coelicolor probable sugar transporter sugar binding lipoprotein SCF11.18, 442 aa; fasta scores: opt: 312 z-score: 352.1 E(): 3.4e-12; 24.4% identity in 454 aa overlap. Contains Pfam match to entry PF01547 SBP_bacterial_1, Bacterial extracellular solute-binding protein and match to Prosite entry PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains N-terminal region signal peptide sequence

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1647905..1649206 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625818.1 lipoprotein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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