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SCO1435 hypothetical protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096861, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO1435
Gene description
hypothetical protein
Locus tag
SCO1435
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC6D7.04
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c1532007-1531846 Pfam match to entry PF00571 CBS, CBS domain, score 28.10, E-value 0.0002
  • Loc: c1532187-1532026 Pfam match to entry PF00571 CBS, CBS domain, score 26.90, E-value 0.00047
  • Loc: c1532829-1532221 Pfam match to entry PF01595 DUF21, Domain of unknown function, score 187.10, E-value 2.9e-52
Names
hypothetical protein
NP_625717.1
  • SC6D7.04, possible integral membrane protein, len: 347 aa. Highly similar to many proteins of unknown function including: Mycobacterium tuberculosis SW:YI41_MYCTU (EMBL:Z83859) hypothetical 36.7 KD protein (345 aa), fasta scores opt: 884 z-score: 1036.1 E(): 0 43.8% identity in 349 aa overlap and Streptomyces coelicolor TR:CAB53285 (EMBL:AL109972) integral membrane protein SCJ9A.24C (339 aa), fasta scores: opt: 705 z-score: 827.6 E():0 36.1% identity in 327 aa overlap. Also similar to the adjoining CDS SC6D7.03 (443 aa), fasta scores: opt: 651 z-score: 666.6 E(): 8.9e-32 36.6% identity in 344 aa overlap. Contains a Pfam matches to entries PF01595 DUF21, Domain of unknown function and 2x Pfam match to entry PF00571 CBS, CBS domain. Also contains a possible N-terminal signal sequence and possible membrane spanning hydrophobic domains

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1531792..1532835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625717.1 hypothetical protein SCO1435 [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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