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SCO1425 transcription regulator AsnC [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096851, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO1425
Gene description
transcription regulator AsnC
Locus tag
SCO1425
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC6D7.14
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c1521988-1521686 Pfam match to entry PF01037 ASNC_trans_reg, AsnC family, score 100.60, E-value 3.1e-26
  • Loc: c1522006-1521926 PS00519 Bacterial regulatory proteins, asnC family signature
Names
transcription regulator AsnC
NP_625707.1
  • SC6D7.14, possible AsnC-family transcriptional regulatory protein, len: 165 aa. Highly similar to several proteins of unknown function and to the Lrp (leucine-responsive regulatory protein) global regulatory proteins e.g. Escherichia coli SW:LRP_ECOLI(EMBL:M35869) leucine-responsive regulatory protein (163 aa), fasta scores opt: 283 z-score: 348.1 E(): 5.2e-12 37.1% identity in 140 aa overlap and Mycobacterium tuberculosis TR:P96896(EMBL:Z92771) hypothetical 16.5 KD protein (150 aa), fasta scores opt: 503 z-score: 608.4 E(): 1.6e-26 50.3% identity in 143 aa overlap. Contains a Pfam match to entry PF01037 ASNC_trans_reg, AsnC family and a Prosite hit to PS00519 Bacterial regulatory proteins, asnC family signature. Contains a helix-turn-helix motif between residues 38..59 (+4.53 SD).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1521620..1522117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625707.1 transcription regulator AsnC [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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