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SCO1400 hypothetical protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096826, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO1400
Gene description
hypothetical protein
Locus tag
SCO1400
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
cvnC4; SC1A8A.20c
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Names
hypothetical protein
NP_625683.1
  • SC1A8A.20c, cvnC4, unknown, len: 131 aa; similar to others from Streptomyces coelicolor and Mycobacterium tuberculosis eg. TR:O86523 (EMBL:AL031124) hypothetical protein from Streptomyces coelicolor (132 aa) fasta scores; opt: 262, z-score: 339.3, E(): 1.8e-11, 41.9% identity in 124 aa overlap and to TR:Q9KZI7 (EMBL:AL353863) Streptomyces coelicolor hypothetical protein SCG8A.12c, 137 aa; fasta scores: opt: 480 Z-score: 582.4 E(): 8.3e-25; 59.690% identity in 129 aa overlap. Local genetic arrangement also seems to be conserved for the Streptomyces coelicolor paralogues

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1486339..1486734 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625683.1 hypothetical protein SCO1400 [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Gene LinkOut

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