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SCO1376 LacI family transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096799, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO1376
Gene description
LacI family transcriptional regulator
Locus tag
SCO1376
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC10A9.18
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 1453135-1453218 Pfam match to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 42.80, E-value 1.1e-10
  • Loc: 1453147-1453203 PS00356 Bacterial regulatory proteins, lacI family signature
  • Loc: 1453300-1454028 Pfam match to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and sugar binding domain of the LacI family., score 159.70, E-value 5e-44
Names
LacI family transcriptional regulator
NP_625660.1
  • SC10A9.18, probable lacI-family transcriptional regulatory protein, len: 356 aa; similar to SW:CELR_THEFU (EMBL:AF086819) Thermomonospora fusca transcription regulator CelR, 340 aa; fasta scores: opt: 681 z-score: 700.7 E(): 1.4e-31; 40.7% identity in 339 aa overlap and to TR:O86795 (EMBL:AL031317) Streptomyces coelicolor probable transcriptional regulator SC6G4.32, 355 aa; fasta scores: opt: 1196 z-score: 1059.6 E(): 0; 56.7% identity in 344 aa overlap. Contains Pfam matches to entries PF00356 lacI, Bacterial regulatory proteins, lacI family and PF00532 Peripla_BP_like, Periplasmic binding proteins and sugar binding domain of the LacI family and match to Prosite entry PS00356 Bacterial regulatory proteins, lacI family signature. Also contains a possible helix-turn-helix motif at residues 12..39 (+7.22 SD)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1453090..1454160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625660.1 LacI family transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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