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SCO1358 LysR family transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096781, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO1358
Gene description
LysR family transcriptional regulator
Locus tag
SCO1358
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SCG61.40c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c1436172-1436080 PS00044 Bacterial regulatory proteins, lysR family signature
  • Loc: c1436214-1435786 Pfam match to entry PF00126 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family, score 153.10, E-value 4.9e-42
Names
LysR family transcriptional regulator
NP_625643.1
  • 2SCG61.40c, possible LysR-family transcriptional regulator, len: 303 aa; similar to many e.g. SW:P11721 (OXYR_ECOLI) hydrogen peroxide-inducible genes activator from Escherichia coli (305 aa) fasta scores; opt: 359, z-score: 409.3, E(): 2.5e-15, 27.6% identity in 297 aa overlap and TR:Q9RDH0 (EMBL:AL136519) LysR-family transcriptional regulator from Streptomyces coelicolor (313 aa) fasta scores; opt: 897, z-score: 1010.0, E(): 0, 49.0% identity in 294 aa overlap. Contains Pfam match to entry PF00126 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family and Prosite match to PS00044 Bacterial regulatory proteins, lysR family signature.

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1435312..1436223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625643.1 LysR family transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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