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SCO1186 LacI family transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096609, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO1186
Gene description
LacI family transcriptional regulator
Locus tag
SCO1186
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCG11A.17
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 1258236-1258319 Pfam match to entry PF00356 lacI, Bacterial regulatory proteins, lacI family, score 30.70, E-value 3.8e-07
  • Loc: 1258248-1258304 PS00356 Bacterial regulatory proteins, lacI family signature
  • Loc: 1258410-1259150 Pfam match to entry PF00532 Peripla_BP_like, Periplasmic binding proteins and LacI family., score 116.60, E-value 4.6e-31
Names
LacI family transcriptional regulator
NP_625476.1
  • SCG11A.17, probable lacI-family transcriptional regulator, len: 341 aa; similar to TR:CAB46346 (EMBL:AJ009798) Streptomyces reticuli regulatory protein CebR, 350 aa; fasta scores: opt: 1241 z-score: 1440.4 E(): 0; 57.9% identity in 347 aa overlap and to SW:PURR_ECOLI (EMBL:J04212) Escherichia coli purine nucleotide synthesis repressor PurR, 340 aa; fasta scores: opt: 587 z-score: 684.5 E(): 9.5e-31; 35.7% identity in 336 aa overlap and to Streptomyces coelicolor SC4G6.23; fasta scores: opt: 989 z-score: 952.6 E(): 0; 53.8% identity in 316 aa overlap. Contains matches to Pfam entries PF00356 lacI, Bacterial regulatory proteins, lacI family and PF00532 Peripla_BP_like, Periplasmic binding proteins and LacI family and to Prosite entry PS00356 Bacterial regulatory proteins, lacI family signature. Contains also a possible helix-turn-helix motif at residues 10..31 (+6.13 SD)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1258218..1259243
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625476.1 LacI family transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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