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SCO1172 amidase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096595, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO1172
Gene description
amidase
Locus tag
SCO1172
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCG11A.03
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 1234985-1235431 Pfam match to entry PF01510 Amidase_2, N-acetylmuramoyl-L-alanine amidase, score 89.80, E-value 5.7e-23
Names
amidase
NP_625462.1
  • SCG11A.03, probable amidase (hypothetical protein), len: 201 aa; similar to SW:AMPD_ECOLI (EMBL:X15237) Escherichia coli anhydro-N-acetylmuramyl-tripeptide amidase AmpD, 183aa; fasta scores: opt: 211 z-score: 267.1 E(): 1.7e-07; 39.5% identity in 114 aa overlap and to Streptomyces coelicolor SC2A11.21c; fasta scores: opt: 674 z-score: 751.6 E(): 0; 50.0% identity in 202 aa overlap. Contains match to Pfam entry PF01510 Amidase_2, N-acetylmuramoyl-L-alanine amidase. Contains possible N-terminal region signal peptide sequence

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1234835..1235440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625462.1 amidase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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