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SCO1167 helicase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096590, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO1167
Gene description
helicase
Locus tag
SCO1167
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SCG11.01; SCG8A.21
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 1227575-1228408 Pfam match to entry PF00176 SNF2_N, SNF2 and others N-terminal domain, score 212.10, E-value 8.4e-60
  • Loc: 1228535-1228783 Pfam match to entry PF00271 helicase_C, Helicases conserved C-terminal domain, score 90.50, E-value 3.3e-23

General protein information

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Names
helicase
NP_733524.1
  • 2SCG11.01, probable helicase (fragment), len: >697 aa; similar to C-terminal region of TR:CAB60181 (EMBL:AL132824) Streptomyces coelicolor helicase SCAH10.27, 977 aa; fasta scores: opt: 2570 z-score: 2915.8 E(): 0; 65.9% identity in 698 aa overlap. Contains Pfam match to entry PF00176 SNF2_N, SNF2 and others N-terminal domain and to PF00271 helicase_C, Helicases conserved C-terminal domain
    SCG8A.21, partial CDS, possible helicase, len: >223aa; similar to TR:CAB60181 (EMBL:AL132824) helicase from Streptomyces coelicolor (977 aa) fasta scores; opt: 601, z-score: 651.6, E(): 7.5e-29, 51.1% identity in 231 aa overlap. Contains possible membrane-spanning hydrophobic regions.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1226297..1228969
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_733524.1 helicase, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Gene LinkOut

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