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SCO1152 helicase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096575, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO1152
Gene description
helicase
Locus tag
SCO1152
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCG8A.06
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 1211615-1212190 Pfam match to entry PF00270 DEAD, DEAD/DEAH box helicase, score 69.50, E-value 4.5e-21

General protein information

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Names
helicase
NP_625444.1
  • SCG8A.06, possible helicase, len: 854 aa; similar in regions to many eg. TR:CAB59484 (EMBL:AL132648) helicase from Streptomyces coelicolor (950 aa) fasta scores; opt: 417, z-score: 463.2, E(): 2.3e-18, 26.5% identity in 755 aa overlap and SW:P47047 (MTR4_YEAST) ATP-dependent RNA helicase DOB1 from Saccharomyces cerevisiae (Baker's yeast) (1073 aa) fasta scores; opt: 335, z-score: 370.4, E(): 3.5e-13, 25.1% identity in 650 aa overlap. Contains Pfam match to entry PF00270 DEAD, DEAD/DEAH box helicase.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1211504..1214068
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625444.1 helicase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Gene LinkOut

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