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SCO1147 ABC transporter transmembrane subunit [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096570, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO1147
Gene description
ABC transporter transmembrane subunit
Locus tag
SCO1147
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SCG38.40; SCG8A.01
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 1206006-1206806 Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region., score 67.60, E-value 2.6e-16
  • Loc: 1206975-1207544 Pfam match to entry PF00005 ABC_tran, ABC transporter, score 74.20, E-value 2.8e-18
  • Loc: 1207323-1207367 PS00211 ABC transporters family signature
Names
ABC transporter transmembrane subunit
NP_733523.1
  • 2SCG38.40, probable ABC transporter transmembrane protein (fragment), len: >35 aa
    SCG8A.01, partial CDS, probable ABC transporter transmembrane subunit, len: >623aa; similar to many eg. TR:O87312 (EMBL:AF027770) FxtA iron sequestration protein from Mycobacterium smegmatis (574 aa) fasta scores; opt: 794, z-score: 866.3, E(): 0, 35.2% identity in 514 aa overlap. Contains Pfam match to entry PF00664 ABC_membrane, ABC transporter transmembrane region, Pfam match to entry PF00005 ABC_tran, ABC transporter and Prosite match to PS00211 ABC transporters family signature. Also contains possible membrane-spanning hydrophobic regions.

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1205898..1207775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_733523.1 ABC transporter transmembrane subunit, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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