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SCO1090 phosphodiesterase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096513, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO1090
Gene description
phosphodiesterase
Locus tag
SCO1090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SCG4.06
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Names
phosphodiesterase
NP_625384.1
  • 2SCG4.06, possible phosphodiesterase, len: 227 aa; similar to TR:Q9RKX8 (EMBL:AL133213) Streptomyces coelicolor phosphodiesterase SC6D7.20c, 255 aa; fasta scores: opt: 287 z-score: 341.1 E(): 1.6e-11; 33.9% identity in 230 aa overlap and to SW:GLPQ_BACSU (EMBL:Z26522) Bacillus subtilis glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) GlpQ, 293 aa; fasta scores: opt: 268 z-score: 318.3 E(): 3e-10; 30.8% identity in 247 aa overlap

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1149998..1150681
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625384.1 phosphodiesterase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Gene LinkOut

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