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SCO0822 DNA-binding protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096245, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO0822
Gene description
DNA-binding protein
Locus tag
SCO0822
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCF43A.12c
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Names
DNA-binding protein
NP_625122.1
  • SCF43A.12c, possible DNA-binding protein, len: 226 aa; unknown function, weakly similar to SW:YHEO_HAEIN (EMBL:U32739) Haemophilus influenzae hypothetical protein (221 aa), fasta scores; opt: 294 z-score: 349.4 E(): 4e-12, 25.9% identity in 216 aa overlap and SW:YHEO_ECOLI (EMBL:U18997) Escherichia coli hypothetical protein (240 aa) (24.7% identity in 223 aa overlap). C-terminal half shows similarity to TR:Q9Z594 (EMBL:AL035478) S.coelicolor possible DNA-binding protein (122 aa) (38.8% identity in 80 aa overlap). Contains probable helix-turn-helix motif at aa 193-214 (Score 1406, +3.98 SD)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    871406..872086 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625122.1 DNA-binding protein [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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