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SNORD3J small nucleolar RNA, C/D box 3J [ Homo sapiens (human) ]

Gene ID: 109616985, updated on 13-May-2022

Summary

Official Symbol
SNORD3Jprovided by HGNC
Official Full Name
small nucleolar RNA, C/D box 3Jprovided by HGNC
Primary source
HGNC:HGNC:52243
See related
Ensembl:ENSG00000221400 AllianceGenome:HGNC:52243
Gene type
snoRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to act upstream of or within response to bacterium. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See SNORD3J in Genome Data Viewer
Location:
10q11.21
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (43417250..43417440, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (44296248..44296438, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (43912698..43912888, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein F Neighboring gene Sharpr-MPRA regulatory region 12153 Neighboring gene uncharacterized LOC124902415 Neighboring gene zinc finger protein 487 Neighboring gene RNA, U7 small nuclear 193 pseudogene

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145740.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL450326
    Related
    ENST00000408473.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    43417250..43417440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    44296248..44296438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)