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SCO0554 beta-mannosidase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1095977, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO0554
Gene description
beta-mannosidase
Locus tag
SCO0554
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
manA; SCF11.34c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c593955-593653 Pfam match to entry PF00553 CBD_2, Cellulose binding domain, score 118.60, E-value 3e-33
  • Loc: c594249-594004 Pfam match to entry PF00041 fn3, Fibronectin type III domain, score 63.70, E-value 4.1e-15
Names
beta-mannosidase
NP_733506.1
  • SCF73.01c, manA, probable beta-mannosidase, len: 327 aa; similar to many e.g. MANA_STRLI P51529 mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78) (363 aa), fasta scores; opt: 1189 z-score: 1332.7 E(): 0, 61.1% identity in 288 aa overlap. Contains N-terminal signal sequence, and Pfam match to entry PF00150 cellulase, Cellulase (glycosyl hydrolase family 5). Also similar to SC2H4.16 (62.2% identity in 288 aa overlap)
    SCF11.34c, possible sugar hydrolase, partial CDS, len: >278 aa; C-teminus similar to SW:GUN4_THEFU (EMBL:L20093) Thermomonospora fusca endoglucanase E-4 precursor (EC 3.2.1.4) (endo-1,4-beta-glucanase E-4), CelD, 880 aa; fasta scores: opt: 544 z-score: 555.0 E(): 1.5e-23; 42.8% identity in 215 aa overlap. Contains Pfam matches to entries PF00553 CBD_2, cellulose binding domain and PF00041 fn3, fibronectin type III domain. Overlaps with Streptomyces coelicolor StF73.01c, len: >327 aa; C-terminus similar to many e.g. MANA_STRLI P51529 mannan endo-1,4-beta-mannosidase precursor (EC 3.2.1.78) (363 aa), fasta scores; opt: 1189 z-score: 1332.7 E(): 0, 61.1% identity in 288 aa overlap. Contains N-terminal signal sequence, and Pfam match to entry PF00150 cellulase, Cellulase (glycosyl hydrolase family 5)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    593641..595338 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_733506.1 beta-mannosidase, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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