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SCO0399 hypothetical protein [ Streptomyces coelicolor A3(2) ]

Gene ID: 1095822, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO0399
Gene description
hypothetical protein
Locus tag
SCO0399
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCF62.25
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 420507-420509 TTA/leucine codon, possible target for bldA regulation
  • Loc: 421455-421478 PS00017 ATP/GTP-binding site motif A (P-loop)
Names
hypothetical protein
NP_624721.1
  • SCF62.25, possible membrane protein, len: 407 aa. Weakly similar to a several e.g. Erwinia amylovora SW: AMSJ_ERWAM (EMBL; X77921) amylovoran biosynthesis protein AmsJ (415 aa), fasta scores opt: 107 z-score: 129.1 E(): 7.8 21.3% identity in 423 aa overlap and Escherichia coli SW:WCAK_ECOLI (EMBL; U38473) colanic acid biosynthesis protein WcaK (426 aa), fasta scores opt: 111 z-score: 133.6 E():4.3 20.1% identity in 398 aa overlap. Contains a possible N-terminal signal sequence and a membrane spanning hydrophobic domain. Also contains a TTA leucine codon, possible target for bldA regulation and a Prosite hit to PS00017 ATP/GTP-binding site motif A (P-loop).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    420492..421715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_624721.1 hypothetical protein SCO0399 [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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