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SCO0379 catalase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1095802, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO0379
Gene description
catalase
Locus tag
SCO0379
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
katA
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: 393525-394937 Pfam match to entry PF00199 catalase, Catalase, score 1129.70, E-value 0
  • Loc: 393633-393683 PS00438 Catalase proximal active site signature
  • Loc: 394503-394529 PS00437 Catalase proximal heme-ligand signature

General protein information

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Names
catalase
NP_624701.1
  • SCF62.05, katA, catalase (EC 1.11.1.6) len: 487 aa. Has been previously sequenced and characterised from Streptomyces coelicolor strain ATCC10147 TR:P77948 (EMBL; X96981) catalase (EC 1.11.1.6) (488 aa), fasta scores opt: 3300 z-score: 3768.6 E():0 98.2% identity in 488 aa overlap. Also similar to another proposed Streptomyces coelicolor catalase (EC 1.11.1.6) TR:Q9Z598 (EMBL; AL035478) SC2G5.25C (487 aa), fasta scores opt: 1704 z-score: 1896.1 E():0 53.8% identity in 483 aa overlap. Contains Prosite hits to PS00437 Catalase proximal heme-ligand signature and to PS00438 Catalase proximal active site signature. Also contains a Pfam match to entry PF00199 catalase, Catalase.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    393498..394961
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_624701.1 catalase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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