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CYFIP1 cytoplasmic FMR1 interacting protein 1 [ Bos indicus (zebu cattle) ]

Gene ID: 109565018, updated on 14-Mar-2024

Summary

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Gene symbol
CYFIP1
Gene description
cytoplasmic FMR1 interacting protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
31
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 2 NC_032651.1 (1023668..1132579, complement)

Chromosome 2 - NC_032651.1Genomic Context describing neighboring genes Neighboring gene NIPA magnesium transporter 1 Neighboring gene DNA-directed RNA polymerases I, II, and III subunit RPABC4 pseudogene Neighboring gene NIPA magnesium transporter 2 Neighboring gene tubulin gamma complex component 5 Neighboring gene transfer RNA glutamic acid (anticodon UUC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032651.1 Chromosome 2 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA 7-methylguanosine cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lamellipodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in modification of synaptic structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCAR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032651.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    1023668..1132579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019968645.1 → XP_019824204.1  LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1

    UniProtKB/TrEMBL
    A0A6P5CFU6
    Conserved Domains (1) summary
    pfam05994
    Location:389 → 1346
    FragX_IP; Cytoplasmic Fragile-X interacting family
Nucleotide Protein
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