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SCO0189 dehydrogenase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1095613, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO0189
Gene description
dehydrogenase
Locus tag
SCO0189
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
crtU; SCJ1.38c
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c179384-179252 overlap with StJ12
Names
dehydrogenase
NP_733493.1
  • SCJ1.38c, crtU, probable dehydrogenase, a partial CDS, len: >336 aa. Highly similar to Streptomyces griseus TR:P72449 (EMBL:X95596) dehydrogenase (517 aa), fasta scores opt: 1277 z-score: 1459.8 E():0 69.0% identity in 281 aa overlap and Synechocystis sp SW:CRTI_SYNY3 (EMBL; X62574) phytoene dehydrogenase (427 aa), fasta scores opt: 133 z-score: 155.8 E():0.25 24.6% identity in 260 aa overlap.
    SCJ12.01c, crtU, probable dehydrogenase, partial CDS, len: >278 aa. Highly similar to Streptomyces griseus TR:P72449 (EMBL:X95596) dehydrogenase (517 aa), fasta scores opt: 1311 z-score: 1471.3 E(): 0 74.0% identity in 269 aa overlap and Synechocystis sp. (strain PCC 6803) SW:CRTI_SYNY3 (EMBL:X62574) phytoene dehydrogenase (EC 1.3.-.-) (phytoene desaturase) (427 aa), fasta scores opt: 219 z-score: 250.2 E(): 1.4e-06 27.6% identity in 254 aa overlap.

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    178519..180087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_733493.1 dehydrogenase, partial [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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