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SCO0117 short chain dehydrogenase [ Streptomyces coelicolor A3(2) ]

Gene ID: 1095541, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO0117
Gene description
short chain dehydrogenase
Locus tag
SCO0117
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCJ11.46
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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 95004-95519 Pfam match to entry PF00106 adh_short, short chain dehydrogenase, score 121.40, E-value 1.7e-32
  • Loc: 95370-95456 PS00061 Short-chain dehydrogenases/reductases family signature.
Names
short chain dehydrogenase
NP_624457.1
  • SCJ11.46, possible oxidoreductase, len: 230 aa; similar to many proposed oxidoreductases eg. TR:O53324 (EMBL:AL021646) oxidoreductase from Mycobacterium tuberculosis (235 aa) fasta scores; opt: 626, z-score: 717.5, E(): 1.3e-32, (50.9% identity in 224 aa overlap). Contains Pfam match to entry PF00106 adh_short, short chain dehydrogenase and Prosite match to PS00061 Short-chain dehydrogenases/reductases family signature

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    94989..95681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_624457.1 short chain dehydrogenase [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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